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Using RPMs through a frontend like Discover or Gnome Software can sometimes have unintended side effects that are much more easily anticipated when using dnf.
Just the other day, I uninstalled something through Gnome Software that was an RPM, and it also removed fuse-fs packages, breaking all of my appimage stuff until I manually installed fuse again.
This doesn’t ever happen with Flatpak in my experience, though I could just be lucky. It makes some sense to limit the destruction potential for less technical frontend installers like Gnome Software and leave the RPMs to something else like dnf. Though, I do really enjoy being able to open a manually downloaded RPM in a nice GUI to install it.
This would have been good context to include in your original post. How the heck is everyone else supposed to know that this is what you were asking about?
Also, you might get more of the answers you’re looking for if you ask in a Pokémon community instead.