
Water company can measure the water that leaves their pumping station(s) - just put a flow meter on the one big pipe. If that doesn’t match the sum of all their customer meters, then water is going somewhere else - broken pipe, illegal connection, meter fraud, whatever.
I would guess that most jurisdictions already have that one big flow meter, because they have to comply with water rights agreements, have to know how much chlorine & fluoride to inject, etc.
Maybe they do commercial customers different, but I’m about 30 miles north of the site in question, and my water use is reported in real time. I can even get a daily report from their web site. It’s hard to believe they’d be less interested in the usage of their 1e6-gallon-per-year commercial customers than their 1e4-gallon-per-year residential customers.